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Fare Guide

Estimated lowest fares found within 7 days

The cheapest airline(s) flying from Tokyo to Kota Kinabalu is AirAsia X.

Travel Period: December 2024 - November 2025

The cheapest month(s) to fly from Tokyo to Kota Kinabalu is May.

Dec 2024
Jan 2025
Feb 2025
Mar 2025
Apr 2025
May 2025
Jun 2025
Jul 2025
Aug 2025
Sep 2025
Oct 2025
Nov 2025

The cheapest day(s) of the week to fly from Tokyo to Kota Kinabalu is Friday.

Sun Sunday
Mon Monday
Tue Tuesday
Wed Wednesday
Thu Thursday
Fri Friday
Sat Saturday

Flight Schedules

Last Updated: Sat, 2 Nov, 2024

Time Earliest
- Earliest
- Latest
Depart Earliest
- Earliest
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- Earliest
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Duration
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- Longest
Stopover
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09:00 NRT

19:05 BKI

11Hrs, 05m 1 Stop (SIN)
NRTTokyo Narita Airport 09:00 - BKI 19:05 11h 05m 1 Stop (SIN) Singapore
NRTTokyo Narita Airport 09:00

SINSingapore Changi Airport 16:35
SINSingapore Changi Airport 15:30

BKIKota Kinabalu Airport 19:05
11h 05m (1h 05m)
1 Stop SIN · Singapore 1h 05m
Scoot (TR 809)Boeing 787 9

Scoot (TR 492)Airbus A321 Neo
Scoot (TR 809)
- -
- -
- W
- -
- -
- -
- S

09:25 NRT

20:40 BKI

12Hrs, 15m 1 Stop (KUL)
NRTTokyo Narita Airport 09:25 - BKI 20:40 12h 15m 1 Stop (KUL) Kuala Lumpur
NRTTokyo Narita Airport 09:25

KULKuala Lumpur International Airport 18:00
KULKuala Lumpur International Airport 15:55

BKIKota Kinabalu Airport 20:40
12h 15m (2h 05m)
1 Stop KUL · Kuala Lumpur 2h 05m
Batik Air (OD 873)Boeing 737 Max 8 Passenger

Batik Air (OD 1006)Boeing 737 800
Batik Air (OD 873)
- M
- -
- W
- -
- F
- -
- S

11:25 NRT

23:40 BKI

13Hrs, 15m 1 Stop (PUS)
NRTTokyo Narita Airport 11:25 - BKI 23:40 13h 15m 1 Stop (PUS) Busan
NRTTokyo Narita Airport 11:25

PUSBusan Airport 19:30
PUSBusan Airport 13:55

BKIKota Kinabalu Airport 23:40
13h 15m (5h 35m)
1 Stop PUS · Busan 5h 35m
Air Busan (BX 111)Airbus

Air Busan (BX 761)Airbus
Air Busan (BX 111)
- -
- -
- W
- -
- -
- S
- -

11:30 NRT

23:40 BKI

13Hrs, 10m 1 Stop (KUL)
NRTTokyo Narita Airport 11:30 - BKI 23:40 13h 10m 1 Stop (KUL) Kuala Lumpur
NRTTokyo Narita Airport 11:30

KULKuala Lumpur International Airport 21:00
KULKuala Lumpur International Airport 18:20

BKIKota Kinabalu Airport 23:40
13h 10m (2h 40m)
1 Stop KUL · Kuala Lumpur 2h 40m
Japan Airlines (JL 723)Boeing 787 9

Malaysia Airlines (MH 2628)Boeing 737 800
Japan Airlines (JL 723)
- M
- -
- W
- -
- F
- -
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11:35 NRT

00:30 BKI

13Hrs, 55m 1 Stop (ICN)
NRTTokyo Narita Airport 11:35 - BKI 00:30 13h 55m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 11:35

ICNSeoul Incheon International Airport 19:50
ICNSeoul Incheon International Airport 14:30

BKIKota Kinabalu Airport 00:30
13h 55m (5h 20m)
1 Stop ICN · Seoul 5h 20m
Jeju Air (7C 1102)Boeing 737 Max 8 Passenger

Jeju Air (7C 2507)Boeing 737 800
Jeju Air (7C 1102)
- M
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- T
- F
- S
- S

11:45 NRT

20:15 BKI

9Hrs, 30m 1 Stop (BWN)
NRTTokyo Narita Airport 11:45 - BKI 20:15 9h 30m 1 Stop (BWN) Bandar Seri Begawan
NRTTokyo Narita Airport 11:45

BWNBandar Seri Begawan Airport 19:35
BWNBandar Seri Begawan Airport 17:15

BKIKota Kinabalu Airport 20:15
9h 30m (2h 20m)
1 Stop BWN · Bandar Seri Begawan 2h 20m
Royal Brunei Airlines (BI 696)Airbus A320 Neo

Royal Brunei Airlines (BI 827)Airbus A320 Neo
Royal Brunei Airlines (BI 696)
- -
- -
- -
- -
- F
- -
- -

11:45 NRT

20:30 BKI

9Hrs, 45m 1 Stop (BWN)
NRTTokyo Narita Airport 11:45 - BKI 20:30 9h 45m 1 Stop (BWN) Bandar Seri Begawan
NRTTokyo Narita Airport 11:45

BWNBandar Seri Begawan Airport 19:50
BWNBandar Seri Begawan Airport 17:15

BKIKota Kinabalu Airport 20:30
9h 45m (2h 35m)
1 Stop BWN · Bandar Seri Begawan 2h 35m
Royal Brunei Airlines (BI 696)Airbus A320 Neo

Royal Brunei Airlines (BI 827)Boeing 787 8
Royal Brunei Airlines (BI 696)
- -
- -
- -
- -
- -
- -
- S

11:45 NRT

19:25 BKI

8Hrs, 40m 1 Stop (BWN)
NRTTokyo Narita Airport 11:45 - BKI 19:25 8h 40m 1 Stop (BWN) Bandar Seri Begawan
NRTTokyo Narita Airport 11:45

BWNBandar Seri Begawan Airport 18:45
BWNBandar Seri Begawan Airport 17:15

BKIKota Kinabalu Airport 19:25
8h 40m (1h 30m)
1 Stop BWN · Bandar Seri Begawan 1h 30m
Royal Brunei Airlines (BI 696)Airbus A320 Neo

Royal Brunei Airlines (BI 827)Airbus A320 Neo
Royal Brunei Airlines (BI 696)
- M
- -
- -
- -
- -
- -
- -

11:55 NRT

22:40 BKI

11Hrs, 45m 1 Stop (ICN)
NRTTokyo Narita Airport 11:55 - BKI 22:40 11h 45m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 11:55

ICNSeoul Incheon International Airport 18:15
ICNSeoul Incheon International Airport 14:55

BKIKota Kinabalu Airport 22:40
11h 45m (3h 20m)
1 Stop ICN · Seoul 3h 20m
T'way Air (TW 212)Boeing 737 800

T'way Air (TW 169)Boeing 737 800
T'way Air (TW 212)
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19:30 PUS

14:40 GMP

12Hrs, 35m 1 Stop (BKI)
PUSBusan Airport 19:30 - GMP 14:40 12h 35m 1 Stop (BKI) Kota Kinabalu
PUSBusan Airport 19:30

HNDTokyo Haneda Airport 12:05
BKIKota Kinabalu Airport 23:40

GMPSeoul Gimpo International Airport 14:40
12h 35m (3h 45m)
1 Stop BKI · Kota Kinabalu 3h 45m
Air Busan (BX 761)Airbus

Asiana Airlines (OZ 1075)Airbus Industrie 330 300
Air Busan (BX 761)
- -
- -
- W
- -
- -
- S
- -

13:20 NRT

00:10 BKI

11Hrs, 50m 1 Stop (ICN)
NRTTokyo Narita Airport 13:20 - BKI 00:10 11h 50m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 13:20

ICNSeoul Incheon International Airport 19:40
ICNSeoul Incheon International Airport 15:55

BKIKota Kinabalu Airport 00:10
11h 50m (3h 45m)
1 Stop ICN · Seoul 3h 45m
Asiana Airlines (OZ 101)Airbus Industrie A380 800

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 101)
- -
- T
- -
- -
- -
- -
- -

13:20 NRT

00:35 BKI

12Hrs, 15m 1 Stop (ICN)
NRTTokyo Narita Airport 13:20 - BKI 00:35 12h 15m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 13:20

ICNSeoul Incheon International Airport 20:05
ICNSeoul Incheon International Airport 15:55

BKIKota Kinabalu Airport 00:35
12h 15m (4h 10m)
1 Stop ICN · Seoul 4h 10m
Asiana Airlines (OZ 101)Airbus Industrie A380 800

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 101)
- -
- -
- W
- -
- -
- S
- S

13:20 NRT

00:25 BKI

12Hrs, 05m 1 Stop (ICN)
NRTTokyo Narita Airport 13:20 - BKI 00:25 12h 05m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 13:20

ICNSeoul Incheon International Airport 19:55
ICNSeoul Incheon International Airport 15:55

BKIKota Kinabalu Airport 00:25
12h 05m (4h)
1 Stop ICN · Seoul 4h
Asiana Airlines (OZ 101)Airbus Industrie A380 800

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 101)
- M
- -
- -
- T
- F
- -
- -

13:50 NRT

00:30 BKI

11Hrs, 40m 1 Stop (PVG)
NRTTokyo Narita Airport 13:50 - BKI 00:30 11h 40m 1 Stop (PVG) Shanghai
NRTTokyo Narita Airport 13:50

PVGShanghai Pudong International Airport 20:00
PVGShanghai Pudong International Airport 16:40

BKIKota Kinabalu Airport 00:30
11h 40m (3h 20m)
1 Stop PVG · Shanghai 3h 20m
Japan Airlines (JL 877)Boeing 737 800

Shanghai Airlines (FM 867)Boeing 737 500 Winglets
Japan Airlines (JL 877)
- -
- T
- W
- T
- -
- S
- S

13:50 NRT

22:30 BKI

9Hrs, 40m 1 Stop (ICN)
NRTTokyo Narita Airport 13:50 - BKI 22:30 9h 40m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 13:50

ICNSeoul Incheon International Airport 18:00
ICNSeoul Incheon International Airport 16:25

BKIKota Kinabalu Airport 22:30
9h 40m (1h 35m)
1 Stop ICN · Seoul 1h 35m
Jin Air (LJ 206)Boeing 737 800

Jin Air (LJ 131)Boeing 737 800
Jin Air (LJ 206)
- -
- -
- W
- T
- -
- S
- S

13:50 NRT

00:30 BKI

11Hrs, 40m 1 Stop (PVG)
NRTTokyo Narita Airport 13:50 - BKI 00:30 11h 40m 1 Stop (PVG) Shanghai
NRTTokyo Narita Airport 13:50

PVGShanghai Pudong International Airport 20:00
PVGShanghai Pudong International Airport 16:30

BKIKota Kinabalu Airport 00:30
11h 40m (3h 30m)
1 Stop PVG · Shanghai 3h 30m
China Eastern Airlines (MU 524)Airbus A359

Shanghai Airlines (FM 867)Boeing 737 500 Winglets
China Eastern Airlines (MU 524)
- -
- T
- W
- T
- -
- S
- S

14:00 NRT

00:30 BKI

11Hrs, 30m 1 Stop (ICN)
NRTTokyo Narita Airport 14:00 - BKI 00:30 11h 30m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 14:00

ICNSeoul Incheon International Airport 19:50
ICNSeoul Incheon International Airport 16:45

BKIKota Kinabalu Airport 00:30
11h 30m (3h 05m)
1 Stop ICN · Seoul 3h 05m
Jeju Air (7C 1104)Boeing 737 800

Jeju Air (7C 2507)Boeing 737 800
Jeju Air (7C 1104)
- M
- T
- W
- T
- F
- S
- S

14:00 NRT

22:30 BKI

9Hrs, 30m 1 Stop (ICN)
NRTTokyo Narita Airport 14:00 - BKI 22:30 9h 30m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 14:00

ICNSeoul Incheon International Airport 18:00
ICNSeoul Incheon International Airport 16:40

BKIKota Kinabalu Airport 22:30
9h 30m (1h 20m)
1 Stop ICN · Seoul 1h 20m
Korean Air (KE 704)Boeing Dreamliner Series 10

Jin Air (LJ 131)Boeing 737 800
Korean Air (KE 704)
- -
- -
- W
- T
- -
- S
- -

14:00 NRT

22:30 BKI

9Hrs, 30m 1 Stop (ICN)
NRTTokyo Narita Airport 14:00 - BKI 22:30 9h 30m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 14:00

ICNSeoul Incheon International Airport 18:00
ICNSeoul Incheon International Airport 16:40

BKIKota Kinabalu Airport 22:30
9h 30m (1h 20m)
1 Stop ICN · Seoul 1h 20m
Korean Air (KE 704)Boeing 787 9

Jin Air (LJ 131)Boeing 737 800
Korean Air (KE 704)
- -
- -
- -
- -
- -
- -
- S

14:05 NRT

01:20 BKI

12Hrs, 15m 1 Stop (PUS)
NRTTokyo Narita Airport 14:05 - BKI 01:20 12h 15m 1 Stop (PUS) Busan
NRTTokyo Narita Airport 14:05

PUSBusan Airport 21:00
PUSBusan Airport 16:45

BKIKota Kinabalu Airport 01:20
12h 15m (4h 15m)
1 Stop PUS · Busan 4h 15m
Jeju Air (7C 1154)Boeing 737 800

Jeju Air (7C 2551)Boeing 737 800
Jeju Air (7C 1154)
- M
- -
- W
- T
- F
- S
- S

14:25 HND

00:30 BKI

11Hrs, 05m 1 Stop (PVG)
HNDTokyo Haneda Airport 14:25 - BKI 00:30 11h 05m 1 Stop (PVG) Shanghai
HNDTokyo Haneda Airport 14:25

PVGShanghai Pudong International Airport 20:00
PVGShanghai Pudong International Airport 17:05

BKIKota Kinabalu Airport 00:30
11h 05m (2h 55m)
1 Stop PVG · Shanghai 2h 55m
Japan Airlines (JL 85)Boeing 787 8

Shanghai Airlines (FM 867)Boeing 737 500 Winglets
Japan Airlines (JL 85)
- -
- T
- W
- T
- -
- S
- S

15:25 NRT

00:30 BKI

10Hrs, 05m 1 Stop (PVG)
NRTTokyo Narita Airport 15:25 - BKI 00:30 10h 05m 1 Stop (PVG) Shanghai
NRTTokyo Narita Airport 15:25

PVGShanghai Pudong International Airport 20:00
PVGShanghai Pudong International Airport 18:20

BKIKota Kinabalu Airport 00:30
10h 05m (1h 40m)
1 Stop PVG · Shanghai 1h 40m
China Eastern Airlines (MU 522)Airbus A359

Shanghai Airlines (FM 867)Boeing 737 500 Winglets
China Eastern Airlines (MU 522)
- -
- T
- W
- T
- -
- S
- -

16:25 NRT

00:25 BKI

9Hrs, 00m 1 Stop (ICN)
NRTTokyo Narita Airport 16:25 - BKI 00:25 9h 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 16:25

ICNSeoul Incheon International Airport 19:55
ICNSeoul Incheon International Airport 19:10

BKIKota Kinabalu Airport 00:25
9h (45m)
1 Stop ICN · Seoul 45m
Asiana Airlines (OZ 103)Airbus Industrie 330 300

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 103)
- M
- -
- -
- T
- F
- -
- -

16:25 NRT

00:35 BKI

9Hrs, 10m 1 Stop (ICN)
NRTTokyo Narita Airport 16:25 - BKI 00:35 9h 10m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 16:25

ICNSeoul Incheon International Airport 20:05
ICNSeoul Incheon International Airport 19:10

BKIKota Kinabalu Airport 00:35
9h 10m (55m)
1 Stop ICN · Seoul 55m
Asiana Airlines (OZ 103)Boeing 777 200 Lr

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 103)
- -
- -
- -
- -
- -
- -
- S

16:25 NRT

00:35 BKI

9Hrs, 10m 1 Stop (ICN)
NRTTokyo Narita Airport 16:25 - BKI 00:35 9h 10m 1 Stop (ICN) Seoul
NRTTokyo Narita Airport 16:25

ICNSeoul Incheon International Airport 20:05
ICNSeoul Incheon International Airport 19:10

BKIKota Kinabalu Airport 00:35
9h 10m (55m)
1 Stop ICN · Seoul 55m
Asiana Airlines (OZ 103)Airbus Industrie 330 300

Asiana Airlines (OZ 7375)Airbus A321 Neo
Asiana Airlines (OZ 103)
- -
- -
- W
- -
- -
- S
- -

21:50 NRT

09:10 BKI

12Hrs, 20m 1 Stop (KUL)
NRTTokyo Narita Airport 21:50 - BKI 09:10 12h 20m 1 Stop (KUL) Kuala Lumpur
NRTTokyo Narita Airport 21:50

KULKuala Lumpur International Airport 06:30
KULKuala Lumpur International Airport 04:55

BKIKota Kinabalu Airport 09:10
12h 20m (1h 35m)
1 Stop KUL · Kuala Lumpur 1h 35m
Batik Air (OD 871)Boeing 737 Max 8 Passenger

Batik Air (OD 1004)Boeing 737 Max 8 Passenger
Batik Air (OD 871)
- -
- T
- -
- T
- -
- S
- -

21:50 NRT

10:40 BKI

13Hrs, 50m 1 Stop (KUL)
NRTTokyo Narita Airport 21:50 - BKI 10:40 13h 50m 1 Stop (KUL) Kuala Lumpur
NRTTokyo Narita Airport 21:50

KULKuala Lumpur International Airport 08:00
KULKuala Lumpur International Airport 04:55

BKIKota Kinabalu Airport 10:40
13h 50m (3h 05m)
1 Stop KUL · Kuala Lumpur 3h 05m
Batik Air (OD 871)Boeing 737 Max 8 Passenger

Batik Air (OD 1002)Boeing 737 800
Batik Air (OD 871)
- -
- T
- -
- T
- -
- S
- -

22:30 NRT

11:10 BKI

13Hrs, 40m 1 Stop (KUL)
NRTTokyo Narita Airport 22:30 - BKI 11:10 13h 40m 1 Stop (KUL) Kuala Lumpur
NRTTokyo Narita Airport 22:30

KULKuala Lumpur International Airport 08:25
KULKuala Lumpur International Airport 05:25

BKIKota Kinabalu Airport 11:10
13h 40m (3h)
1 Stop KUL · Kuala Lumpur 3h
Malaysia Airlines (MH 71)Airbus Industrie 330 300

Malaysia Airlines (MH 2612)Boeing 737 800
Malaysia Airlines (MH 71)
- -
- -
- W
- T
- F
- -
- -

22:55 HND

11:30 BKI

13Hrs, 35m 1 Stop (SIN)
HNDTokyo Haneda Airport 22:55 - BKI 11:30 13h 35m 1 Stop (SIN) Singapore
HNDTokyo Haneda Airport 22:55

SINSingapore Changi Airport 09:00
SINSingapore Changi Airport 05:15

BKIKota Kinabalu Airport 11:30
13h 35m (3h 45m)
1 Stop SIN · Singapore 3h 45m
Singapore Airlines (SQ 635)Airbus A359

Scoot (TR 490)Airbus A321 Neo
Singapore Airlines (SQ 635)
- M
- -
- W
- -
- F
- -
- S

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What’s the most popular airline flying from Tokyo to Kota Kinabalu?

The most popular airline flying from Tokyo to Kota Kinabalu is Scoot. Find the latest flight deals on Wego.

How far is Kota Kinabalu from Tokyo?

The flight distance between Tokyo and Kota Kinabalu is 4090km. Check all available flights on Wego.

When is the earliest and latest flight of the day?

The earliest flight of the day departs at 09:00. The last flight of the day departs at 09:00. See the full list of flight times on Wego.

Popular Airlines flying from Tokyo to Kota Kinabalu

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